Data

Data associated with the Polistes dominula genome project has been deposited in the following locations.

Raw reads

Raw Illumina data for the project has been deposited in the NCBI Short Read Archive.

• Whole genome shotgun reads (accession SAMN02584905)
• RNA-Seq reads (accessions SAMN03940809-SAMN03940820)
• BS-Seq reads (accessions SAMN03946123 and SAMN03946134)

Assemblies

Genome and transcriptome assemblies have been deposited in GenBank.

• Genome assembly (accession GCA_001465965.1)
• Transcriptome assembly (accession GEDB00000000.1)

Annotation

Genome annotation has been submitted to NCBI but is not yet published. In the mean time, NCBI has performed their own automated annotation of P. dominula, which is now available from GenBank and RefSeq.

Other data

Data associated with various analyses has been deposited in figshare.

• Genome assembly (doi:10.6084/m9.figshare.1593098)
• Repeat masking (doi:10.6084/m9.figshare.1593187)
• Transcriptome assembly (doi:10.6084/m9.figshare.1593168)
• Spliced alignments of pseudotranscripts against the genome (doi:10.6084/m9.figshare.1593326)
• Spliced alignments of reference proteins against the genome (doi:10.6084/m9.figshare.1593958)
• Genome annotation (doi:10.6084/m9.figshare.1593326)

Sequences, annotations, and alignments are also available at PdomGDB, an integrated data resource including a genome browser, a BLAST server, and a community annotation portal.